garnett
v0.6.0
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Trajectory API
Shape Definitions
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Developer’s Guide
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garnett
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Index
A
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B
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C
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D
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E
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F
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G
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H
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I
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L
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M
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N
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O
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P
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R
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S
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T
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U
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V
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W
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X
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Y
A
angmom (garnett.trajectory.Frame attribute)
(garnett.trajectory.Trajectory attribute)
arrays_loaded() (garnett.dcdfilereader.DCDTrajectory method)
(garnett.trajectory.Trajectory method)
ArrowShape (class in garnett.shapes)
B
Box (class in garnett.trajectory)
box (garnett.trajectory.Frame attribute)
C
charge (garnett.trajectory.Frame attribute)
(garnett.trajectory.Trajectory attribute)
CifFileReader (class in garnett.reader)
CifFileWriter (class in garnett.writer)
ConvexPolyhedronShape (class in garnett.shapes)
ConvexPolyhedronUnionShape (class in garnett.shapes)
ConvexSpheropolyhedronShape (class in garnett.shapes)
copyto_snapshot() (garnett.trajectory.Frame method)
D
data (garnett.trajectory.Frame attribute)
data_keys (garnett.trajectory.Frame attribute)
DCDFileReader (class in garnett.reader)
DCDTrajectory (class in garnett.dcdfilereader)
diameter (garnett.trajectory.Frame attribute)
(garnett.trajectory.Trajectory attribute)
dimensions (garnett.trajectory.Box attribute)
dtype (garnett.trajectory.Frame attribute)
dump() (garnett.writer.CifFileWriter method)
(garnett.writer.PosFileWriter method)
E
EllipsoidShape (class in garnett.shapes)
F
FallbackShape (class in garnett.shapes)
Frame (class in garnett.trajectory)
G
GeneralPolyhedronShape (class in garnett.shapes)
get_box_array() (garnett.trajectory.Box method)
get_box_matrix() (garnett.trajectory.Box method)
GetarFileReader (class in garnett.reader)
GSDHOOMDFileReader (class in garnett.reader)
GSDHOOMDFileWriter (class in garnett.writer)
H
HOOMDXMLFileReader (class in garnett.reader)
I
image (garnett.trajectory.Frame attribute)
(garnett.trajectory.Trajectory attribute)
L
load() (garnett.trajectory.Frame method)
(garnett.trajectory.Trajectory method)
load_arrays() (garnett.dcdfilereader.DCDTrajectory method)
(garnett.trajectory.Trajectory method)
loaded() (garnett.trajectory.Frame method)
(garnett.trajectory.Trajectory method)
Lx (garnett.trajectory.Box attribute)
Ly (garnett.trajectory.Box attribute)
Lz (garnett.trajectory.Box attribute)
M
make_snapshot() (garnett.trajectory.Frame method)
mass (garnett.trajectory.Frame attribute)
(garnett.trajectory.Trajectory attribute)
moment_inertia (garnett.trajectory.Frame attribute)
(garnett.trajectory.Trajectory attribute)
N
N (garnett.trajectory.Trajectory attribute)
O
orientations (garnett.trajectory.Frame attribute)
(garnett.trajectory.Trajectory attribute)
P
PolygonShape (class in garnett.shapes)
pos_string (garnett.shapes.ArrowShape attribute)
(garnett.shapes.ConvexPolyhedronShape attribute)
(garnett.shapes.ConvexPolyhedronUnionShape attribute)
(garnett.shapes.ConvexSpheropolyhedronShape attribute)
(garnett.shapes.EllipsoidShape attribute)
(garnett.shapes.GeneralPolyhedronShape attribute)
(garnett.shapes.PolygonShape attribute)
(garnett.shapes.Shape attribute)
(garnett.shapes.SphereShape attribute)
(garnett.shapes.SphereUnionShape attribute)
(garnett.shapes.SpheropolygonShape attribute)
PosFileReader (class in garnett.reader)
PosFileWriter (class in garnett.writer)
positions (garnett.trajectory.Frame attribute)
(garnett.trajectory.Trajectory attribute)
PyDCDFileReader (class in garnett.reader)
R
read() (garnett.reader.CifFileReader method)
(garnett.reader.DCDFileReader method)
(garnett.reader.GSDHOOMDFileReader method)
(garnett.reader.GetarFileReader method)
(garnett.reader.HOOMDXMLFileReader method)
(garnett.reader.PosFileReader method)
(in module garnett)
round() (garnett.trajectory.Box method)
S
set_dtype() (garnett.trajectory.Trajectory method)
Shape (class in garnett.shapes)
shapedef (garnett.trajectory.Frame attribute)
SphereShape (class in garnett.shapes)
SphereUnionShape (class in garnett.shapes)
SpheropolygonShape (class in garnett.shapes)
T
to_plato_scene() (garnett.trajectory.Frame method)
TRAJ_ATTRIBUTES (garnett.trajectory.Trajectory attribute)
Trajectory (class in garnett.trajectory)
type (garnett.trajectory.Trajectory attribute)
type_ids (garnett.trajectory.Trajectory attribute)
type_shape (garnett.shapes.ArrowShape attribute)
(garnett.shapes.ConvexPolyhedronShape attribute)
(garnett.shapes.ConvexPolyhedronUnionShape attribute)
(garnett.shapes.ConvexSpheropolyhedronShape attribute)
(garnett.shapes.EllipsoidShape attribute)
(garnett.shapes.GeneralPolyhedronShape attribute)
(garnett.shapes.PolygonShape attribute)
(garnett.shapes.Shape attribute)
(garnett.shapes.SphereShape attribute)
(garnett.shapes.SphereUnionShape attribute)
(garnett.shapes.SpheropolygonShape attribute)
types (garnett.trajectory.Frame attribute)
(garnett.trajectory.Trajectory attribute)
U
unload() (garnett.trajectory.Frame method)
V
velocities (garnett.trajectory.Frame attribute)
(garnett.trajectory.Trajectory attribute)
view_rotation (garnett.trajectory.Frame attribute)
W
write() (garnett.writer.CifFileWriter method)
(garnett.writer.GSDHOOMDFileWriter method)
(garnett.writer.PosFileWriter method)
(in module garnett)
X
xy (garnett.trajectory.Box attribute)
xyz() (garnett.dcdfilereader.DCDTrajectory method)
xz (garnett.trajectory.Box attribute)
Y
yz (garnett.trajectory.Box attribute)
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