garnett
v0.5.0
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Trajectory API
Shape Definitions
Reference
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Developer’s Guide
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garnett
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Index
A
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B
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C
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D
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E
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F
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G
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H
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I
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L
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M
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N
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O
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P
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R
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S
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T
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U
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V
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W
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X
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Y
A
angmom (garnett.trajectory.Frame attribute)
(garnett.trajectory.Trajectory attribute)
arrays_loaded() (garnett.dcdfilereader.DCDTrajectory method)
(garnett.trajectory.Trajectory method)
ArrowShape (class in garnett.shapes)
B
Box (class in garnett.trajectory)
box (garnett.trajectory.Frame attribute)
C
charge (garnett.trajectory.Frame attribute)
(garnett.trajectory.Trajectory attribute)
CifFileReader (class in garnett.reader)
CifFileWriter (class in garnett.writer)
ConvexPolyhedronShape (class in garnett.shapes)
ConvexPolyhedronUnionShape (class in garnett.shapes)
ConvexSpheropolyhedronShape (class in garnett.shapes)
copyto_snapshot() (garnett.trajectory.Frame method)
D
data (garnett.trajectory.Frame attribute)
data_keys (garnett.trajectory.Frame attribute)
DCDFileReader (class in garnett.reader)
DCDTrajectory (class in garnett.dcdfilereader)
diameter (garnett.trajectory.Frame attribute)
(garnett.trajectory.Trajectory attribute)
dimensions (garnett.trajectory.Box attribute)
dtype (garnett.trajectory.Frame attribute)
dump() (garnett.writer.CifFileWriter method)
(garnett.writer.PosFileWriter method)
E
EllipsoidShape (class in garnett.shapes)
F
FallbackShape (class in garnett.shapes)
Frame (class in garnett.trajectory)
G
GeneralPolyhedronShape (class in garnett.shapes)
get_box_array() (garnett.trajectory.Box method)
get_box_matrix() (garnett.trajectory.Box method)
GetarFileReader (class in garnett.reader)
GSDHOOMDFileReader (class in garnett.reader)
GSDHOOMDFileWriter (class in garnett.writer)
H
HOOMDXMLFileReader (class in garnett.reader)
I
image (garnett.trajectory.Frame attribute)
(garnett.trajectory.Trajectory attribute)
L
load() (garnett.trajectory.Frame method)
(garnett.trajectory.Trajectory method)
load_arrays() (garnett.dcdfilereader.DCDTrajectory method)
(garnett.trajectory.Trajectory method)
loaded() (garnett.trajectory.Frame method)
(garnett.trajectory.Trajectory method)
Lx (garnett.trajectory.Box attribute)
Ly (garnett.trajectory.Box attribute)
Lz (garnett.trajectory.Box attribute)
M
make_snapshot() (garnett.trajectory.Frame method)
mass (garnett.trajectory.Frame attribute)
(garnett.trajectory.Trajectory attribute)
moment_inertia (garnett.trajectory.Frame attribute)
(garnett.trajectory.Trajectory attribute)
N
N (garnett.trajectory.Trajectory attribute)
O
orientations (garnett.trajectory.Frame attribute)
(garnett.trajectory.Trajectory attribute)
P
PolygonShape (class in garnett.shapes)
PosFileReader (class in garnett.reader)
PosFileWriter (class in garnett.writer)
positions (garnett.trajectory.Frame attribute)
(garnett.trajectory.Trajectory attribute)
PyDCDFileReader (class in garnett.reader)
R
read() (garnett.reader.CifFileReader method)
(garnett.reader.DCDFileReader method)
(garnett.reader.GSDHOOMDFileReader method)
(garnett.reader.GetarFileReader method)
(garnett.reader.HOOMDXMLFileReader method)
(garnett.reader.PosFileReader method)
(in module garnett)
round() (garnett.trajectory.Box method)
S
set_dtype() (garnett.trajectory.Trajectory method)
Shape (class in garnett.shapes)
shape_dict (garnett.shapes.ConvexPolyhedronShape attribute)
(garnett.shapes.ConvexSpheropolyhedronShape attribute)
(garnett.shapes.EllipsoidShape attribute)
(garnett.shapes.GeneralPolyhedronShape attribute)
(garnett.shapes.PolygonShape attribute)
(garnett.shapes.SphereShape attribute)
(garnett.shapes.SpheropolygonShape attribute)
shapedef (garnett.trajectory.Frame attribute)
SphereShape (class in garnett.shapes)
SphereUnionShape (class in garnett.shapes)
SpheropolygonShape (class in garnett.shapes)
T
TRAJ_ATTRIBUTES (garnett.trajectory.Trajectory attribute)
Trajectory (class in garnett.trajectory)
type (garnett.trajectory.Trajectory attribute)
type_ids (garnett.trajectory.Trajectory attribute)
types (garnett.trajectory.Frame attribute)
(garnett.trajectory.Trajectory attribute)
U
unload() (garnett.trajectory.Frame method)
V
velocities (garnett.trajectory.Frame attribute)
(garnett.trajectory.Trajectory attribute)
view_rotation (garnett.trajectory.Frame attribute)
W
write() (garnett.writer.CifFileWriter method)
(garnett.writer.GSDHOOMDFileWriter method)
(garnett.writer.PosFileWriter method)
(in module garnett)
X
xy (garnett.trajectory.Box attribute)
xyz() (garnett.dcdfilereader.DCDTrajectory method)
xz (garnett.trajectory.Box attribute)
Y
yz (garnett.trajectory.Box attribute)
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